Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938024.1_cds_XP_016483052.1_74202
CDS Infomation

[gene=LOC107803792] [db_xref=GeneID:107803792] [protein=putative CCA tRNA nucleotidyltransferase 2] [protein_id=XP_016483052.1] [location=join(53805..53966,62702..62832,66152..66269,67351..67403,69049..69098,69202..69300,72591..72700,72852..72979,75694..75760,76160..76243,76531..76593,76711..76855,76936..77103,77458..77555,77636..77740)] [gbkey=CDS]
Sequence

ATGGTGGAGAAGCCAGCATCTCCGCCGTCGTCAGTCCAAGTGAAGGACCATATTGATTTG
ACGGAACATGAGGAGAAGATATTCAACTGTCTTCTTCAAGTTGTCGAGCAATTTAATCTC
AAAACACAGCTTCGTGTTGCTGGTGGTTGGGTTCGCGATAAGCTGCTAGGTGATGAATGC
TATGATATTGATATTGCTCTAGACAACATGTATGGACGAGAATTCTGTGAGAAAGTGAAT
GAGTACTTATCAGCATCAGGTCAGGAAACCCAAGGAGTTGGTGTAATCCAGTGCAATCCC
GAACAGTCAAAGCACTTGGAAACAGCAAGGATGCGCCTTTATGACGTATGGATTGATTTT
GTCAACTTAAGAGCAGAAGACTACAGTGAGAACAGTCGTATTCCAACAATGAAATTTGGC
ACTGCAAAAGAGGATGCAGATCGCAGGGATTTGACCATTAATAGCTTGTTTTACAACATA
AACACCAAGTCAGTCGAAGATTTTACAGAAAGAGGCATTGCAGATCTGAAGTCGGGAAAA
ATTGTCACCCCACTACCTCCAAAGCAGACCTTTTTGGATGATCCCCTAAGAGTCCTTCGA
GCTGTTCGTTTTGGTGCAAGGTTTGGGTTTATGTTAGATGAAGAACTAAAGAAGGCAGCT
GCTGATGAGGATGTGAGGGCTGCTATTGCTGATAAAATTAGCAGAGAACGGATAGGACAT
GAAATTGATCTTATGATATCTGGCAAACAACCAGTCAAAGCAATGACTTATATTGCTGAC
TTGAAATTATTTTGGGCTGTATTTAGTATTCCTACTGATTTTGAACCTTCAATTCCTGAG
GAATATGATAGGCTGTGTGTTGCTTGCTTGGATTTAGCTTGTGGGCTTTTAAACTTAATT
GGATGGTCCTCATTTTCTGATGATCAAAGGAGACTTTGCCTGTATGCTGCTTTATTTCTG
CCATTCAGAGAGACCATTTATAGAGATAACAAAGCCAAAAAGATTCCAGTTGTCAACTAT
ATTTTTCGCAATTCTCTCAAGTTGAAGGCCAGTGATGCGGAAACAGTCATAAGCTTGCAT
ACTGCAACCAAGAAGTTTGTCACCTTAATTCCATCACTTGTTTCTAAAGAAGATATCAAA
GTTTTAGAAGTTGAATGGAAAAAAGATACCATTGAGGTTCCAATTGCTTCGAGGCTTAGA
ATATTGGCTGGACTGCTACTTAGAGAAATTAAAGAATTCTGGCGCGTTGCTCTTCTTCTA
TCTATGCAATTACATCCCGTTGACATTGTGTCCTCTACAAGCTTCTCAAATGAGAACTTT
GAACTGGAGAAGAGAAGTGGATTATTCAAGTCAGTAGAGAATGCAGTGGGAGCGCTAGGT
CTGGAGAAGGTTTGGGAATTGAAACCTTTGGTTAATGGAAAGGAAATTATGAACATTTTG
CAGATTAAAAGTGGAGGGCCAGTTGTTAGAGAATGGCAACAAAAATTGCTGGAGTGGCAG
CTCGCACATCCTTCTGGTACTGCTGAAGAATGTCTTGATTGGATGAAGCAAACACAGTCA
AAACGTGCAAGAACTGAGTAG

Peptide Sequence

PEP ID

XP_016483052.1
PEP Infomation

PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Nicotiana tabacum]
Sequence

MVEKPASPPSSVQVKDHIDLTEHEEKIFNCLLQVVEQFNLKTQLRVAGGWVRDKLLGDEC
YDIDIALDNMYGREFCEKVNEYLSASGQETQGVGVIQCNPEQSKHLETARMRLYDVWIDF
VNLRAEDYSENSRIPTMKFGTAKEDADRRDLTINSLFYNINTKSVEDFTERGIADLKSGK
IVTPLPPKQTFLDDPLRVLRAVRFGARFGFMLDEELKKAAADEDVRAAIADKISRERIGH
EIDLMISGKQPVKAMTYIADLKLFWAVFSIPTDFEPSIPEEYDRLCVACLDLACGLLNLI
GWSSFSDDQRRLCLYAALFLPFRETIYRDNKAKKIPVVNYIFRNSLKLKASDAETVISLH
TATKKFVTLIPSLVSKEDIKVLEVEWKKDTIEVPIASRLRILAGLLLREIKEFWRVALLL
SMQLHPVDIVSSTSFSNENFELEKRSGLFKSVENAVGALGLEKVWELKPLVNGKEIMNIL
QIKSGGPVVREWQQKLLEWQLAHPSGTAEECLDWMKQTQSKRARTE

Transcript Sequence

Gene sequence data has not been registered.